NIfTI conversion

For personal data voluba only supports the NIfTI-format (.nii or .nii.gz). To convert your data we recommend one of the following tools:

  1. ITK-SNAP
  2. 3D Slicer
  3. Fiji

ITK-SNAP

  1. Install ITK-SNAP
  2. Launch ITK-SNAP
  3. Open your file (via File → Open Main Image ...)
  4. Save file as NIfTI (via File → Save Image → Main Image ... → Select File Format "NiFTI")

3D Slicer

  1. Install 3D Slicer
  2. Launch 3D Slicer
  3. Open your file (via File → Add Data OR File → Add DICOM Data → Import DICOM files → Select patient
  4. → Select volume on bottom by double-clicking (Will open view)
  5. Save file as NIfTI (via File → Save Data → check the file, under FileFormat select "NifTI (.nii)" or "NifTI ( .nii.gz)", choose your output directory under Directory)

Fiji

  1. Install Fiji
  2. Download NIfTI Plugin (NIfTI_io.jar)
  3. Move NIfTI_io.jar to the Fiji plugins folder (Fiji.app/plugins/)
  4. Launch Fiji
  5. Open your file (via File → Open/Open samples/Import according to filetype)
  6. Save file as NIfTI (via File → Save As → NIfTI-1)